PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004487156.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family Trihelix
Protein Properties Length: 934aa    MW: 106936 Da    PI: 8.069
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004487156.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.83.7e-1512100286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W+++ + +Li+a  e+  +l+r++l+k++W+e++k++     + ++ +r+ +qCk++++ l+k+yk +k++ ++   +    +p+fd l+
  XP_004487156.1  12 WSEEATFTLIDAWGERYVKLNRSNLRKKHWKEIAKAVndrhnHVKKARRTNVQCKNRIDALKKKYKIEKARVSES-GDYADYWPFFDVLD 100
                     *************************************99888778899**********************99985.777789****9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138377.3E-2310102No hitNo description
PfamPF030048.1E-7408548IPR004252Probable transposase, Ptta/En/Spm, plant
SuperFamilySSF540012.75E-12757924No hitNo description
Gene3DG3DSA:3.30.310.1303.1E-4833876No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006508Biological Processproteolysis
GO:0008234Molecular Functioncysteine-type peptidase activity
Sequence ? help Back to Top
Protein Sequence    Length: 934 aa     Download sequence    Send to blast
MEDSLTGYED GWSEEATFTL IDAWGERYVK LNRSNLRKKH WKEIAKAVND RHNHVKKARR  60
TNVQCKNRID ALKKKYKIEK ARVSESGDYA DYWPFFDVLD SLIGDTFPAK NLSPVIVPPV  120
KVPTWTPPMK APAWALAPVG PRSRSQKRPA PVTTTSASLE SLEEEEEGED SCFRRNLSAF  180
AAAVAEAAES EIESSDGLIN ESKKLKRGIN EMEFGGIEKF GEIYERVEEE KQREMVELEK  240
QKMQSAKDLE YQSKTTKRSK NMNDPSVPSQ SELNAQSTQK NVRRATLLKE FLALNRIAGQ  300
RISVEFDQST GMPSGENKTK FKSHVAFLGR SEVSILIDEW DSVDENVKNQ IWATILKIWD  360
ILNSEFLKKK WISYAGERWR AFKTCLTSRY IHGDLCNKSP LEVYDFLDEE TWQAFIQKRK  420
DPSFLDKRKK AQMVQVYNKC PHRLSRGGYE LLKKRMMQEK LKQSKESSVD LVAAPPSPLS  480
RHEMWKRARQ RPSGDYTSED TRKIAEKIDS LVEQTTQGTF VPQGRKDILT EAIGQPEHPG  540
RVRGVGQGVG IRQYFGPHSR NSTTPVLSNE QIKTMKVELT QQIKEQLMQD LTTMGFSKLY  600
PKVSTCSPNA TVHTSTKGSC SVVTPTLEED DIPERCELYV DNFLHVVAYG NAYKIGPTIH  660
NQILDNDMVK VVVDEVLDAN VQVPMPTDEV KTVGQAPNNF IQWPKRFIRI VSDKDVDGSK  720
KADVSPKRSE PQLDSVQQLV LKAMNMSGSI RLDLEHDETD IFWLSQRDII ELCMGKQELC  780
ITILQLWLTY LHRLCIDVGK NDLYGFIDPY FIKSQLDPTN AQTYLQKKLF EDKRECYLAP  840
YHNNCHWQLL IICPRKNTVV FLCSLGRKPE KDIIHIVDSA LGECNKLQGI RKKPIWFVPD  900
IFGNLKSFHD DELKNVRQCC ASLILEYIQT IENA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004487156.10.0PREDICTED: uncharacterized protein LOC101499726 isoform X2
TrEMBLG7IU290.0G7IU29_MEDTR; Myb/SANT-like DNA-binding domain protein
STRINGGLYMA01G42340.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.14e-42sequence-specific DNA binding transcription factors